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Services

Experimental design: Planning with the researchers the optimal experiment to the research questions in hand.

Initial analysis:

  • RNA-Seq

  • Small RNA-Seq

  • Single cell sequencing

  • NanoString

  • ChIP-Seq: Identification of protein binding sites and methylation on DNA

  • De-novo assembly

  • Bacterial resequencing: SNP analysis

  • Bacterial microbiome

  • Whole Exome Sequencing

  • Metagenomics

  • CRISPR libraries

  • Proteomics

Advanced analysis:

  • We analyze high throughput data from different sources, such as next generation sequencing, single cell sequencing, NanoString, microarrays and proteomics.

  • We provide downstream pathway analysis and hypotheses generation, with a unique support in complex systems involving multiple comparisons

    • Cut-off approach (e.g. IPA)

    • Non cut-off approach (Gene Set Enrichment Analysis)

    • Networks analysis and visualization

Tailor-made pipelines for specific lab needs:

  • Graphic interface for computational tools

  • Bioinformatics programming

Help with grants writing

Help with paper writing - see our publications list

 

To schedule an IPA session, email Sharona.elgavish@mail.huji.ac.il